Introduction to the Analysis and Visualization of Biological Networks with Cytoscape
Lausanne, 11-12 July 2011
This course will provide an introduction to the analysis and visualization of biological networks as well as a tutorial on Cytoscape, one of the common tools used in biology for network analysis. The course will cover the following main subjects:
- A Biological Network Taxonomy
- Analytical Approaches
- Visualization Approaches
- Introduction to Cytoscape
- Cytoscape use cases:
- Expression data analysis
- Clustering of protein-protein interaction networks
- Introduction to plugin development
John "Scooter" Morris, Ph.D. (UCSF)
Allan Kuchinsky (Agilent Labs)
Alex Pico, Ph.D. (Gladstone Institutes)
Participants should bring their own laptops with Java 6 loaded.
Installers for Cytoscape and all necessary plugins and sample data sets will be provided.
Practical organization - Location
Sessions runs from 9:00 to 17:00 approximately, with a lunch break.
This two-day course is held at the Génopode building (Auditorium A) of the University of Lausanne.
[The registration is closed]
This workshop is also open to guests. Please note that there is no registration fee but also no refunding for participants' expenses.
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This course is provided in coordination with the IMEX consortium.
IMEx is funded by the European Commission under PSIMEx
contract number FP7-HEALTH-2007-223411